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Biological and computational evaluation of carbazole-based bis-thiosemicarbazones: A selective enzyme inhibition study between α-amylase and α-glucosidase

Yıl 2023, Cilt: 53 Sayı: 1, 39 - 44, 28.04.2023

Hasan Şahin Alev Arslantürk Bingül İbrahim Fazıl Şengül Murat Bingül

https://doi.org/10.26650/IstanbulJPharm.2023.1164443

Öz

Background and Aims: Carbazole heterocyclic systems are an important class of chemicals that have been reported as valuable antidiabetic agents in the literature. Uncoincidentally, the ayurvedic antidiabetic plant Murraya koenigii Spreng (Curry tree) was the source of the first carbazole alkaloids. Another important class of chemicals in terms of antidiabetic activity is thiosemicarbazones. The hybridization of these fragments can create new potential inhibitors for α-amylase and α-glucosidase enzyme inhibitions, which is one approach controlling post-prandial hyperglycemia in type 2 diabetes patients. Methods: The four carbazole-based thiosemicarbazone compounds (4a-d) have been selected from the group library and α-amylase and α-glucosidase inhibition potencies have been evaluated. A molecular modelling study has also been carried out to provide a complementary study on how the molecules behave in terms of the enzymes’ catalytic properties.
Results: All compounds showed higher potencies than the standard acarbose in terms of α-glucosidase inhibition and very low inhibitions toward α-amylase compared to acarbose. Having the number of hydrophobic interactions determine the po- tency of the compounds was crucial with compound 4a being shown to provide the highest number of conventional H bonds and the highest percentage of inhibition values for both enzymes.
Conclusion: Carbazole-based thiosemicarbazone compounds have been found to be promising candidates in terms of both their potency and relative selectivity for developing new inhibitors that lack the usual side effects of current drugs.

Anahtar Kelimeler

α-Amylase α-Glucosidase Carbazole Molecular Docking Thiosemicarbazones

Destekleyen Kurum

Dicle University Scientific Research Project Department (DÜBAP)

Proje Numarası

Eczacılık.21.002

Teşekkür

The authors acknowledge the Dicle University Scientific Research Project Department (DÜBAP) which supported the study’s bioassay part (Eczacılık.21.002)

Kaynakça

  • Adib, M., Peytam, F., Shourgeshty, R., Mohammadi-Khanaposhtani, M., Jahani, M., Imanparast, S., . . . Mahdavi, M. (2019). Design and synthesis of new fused carbazole-imidazole derivatives as anti- diabetic agents: In vitro α-glucosidase inhibition, kinetic, and in silico studies. Bioorganic & Medicinal Chemistry Letters, 29(5), 713- 718. doi:10.1016/j.bmcl.2019.01.012
  • Antholine, W., Knight, J., Whelan, H., & Petering, D. H. (1977). Stud- ies of the reaction of 2-formylpyridine thiosemicarbazone and its iron and copper complexes with biological systems. Molecular Pharmacology, 13(1), 89-98.
  • Apostolidis, E., & Lee, C. M. (2010). In vitro potential of Ascophyl- lum nodosum phenolic antioxidant-mediated α-glucosidase and α-amylase inhibition. Journal of Food Science, 75(3), 97-102. doi:10.1111/j.1750-3841.2010.01544.x
  • Beidokhti, M. N., Eid, H. M., Villavicencio, M. L. S., Jager, A. K., Lobbens, E. S., Rasoanaivo, P. R., . . . Staerk, D. (2020). Evaluation of the anti- diabetic potential of Psidium guajava L. (Myrtaceae) using assays for alpha-glucosidase, alpha-amylase, muscle glucose uptake, liver glucose production, and triglyceride accumulation in adipocytes. J Ethnopharmacol, 257, 112877. doi:10.1016/j.jep.2020.112877
  • Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weis- sig, H., . . . Bourne, P. E. (2000). The Protein Data Bank. Nucleic Acids Res, 28(1), 235-242. doi:10.1093/nar/28.1.235
  • Bingul, M., Şenkuytu, E., Saglam, M. F., Boga, M., Kandemir, H., & Sen- gul, I. F. (2019). Synthesis, photophysical and antioxidant properties of carbazole-based bis-thiosemicarbazones. Research on Chemical Intermediates, 45(9), 4487-4499. doi:10.1007/s11164-019-03844-x
  • Biovia, D. S. (2019). Discovery Visualizer Studio v19.1.0.18287 (Ver- sion v19.1.0.18287). San Diego: Dassault Systemes.
  • Dhameja, M., & Gupta, P. (2019). Synthetic heterocyclic candi- dates as promising α-glucosidase inhibitors: An overview. Euro- pean Journal of Medicinal Chemistry, 176, 343-377. doi:10.1016/j. ejmech.2019.04.025
  • Frisch, M. J., Schlegel, H. B., Scuseria, G. E., Robb, M. A., Cheeseman, J. R., Scalmani, G., . . . Nakatsuji, H. (2009). Gaussian 09, Revision E.01. Wallingford CT.
  • Graebe, C., & Glaser, C. (1872). Ueber Carbazol. Berichte der Deutschen Chemischen Gesellschaft. 163(3), 343-360. doi. org/10.1002/jlac.18721630305
  • Iqbal, S., Khan, M. A., Javaid, K., Sadiq, R., Fazal-ur-Rehman, S., Choudhary, M. I., & Basha, F. Z. (2017). New carbazole linked 1,2,3-triazoles as highly potent non-sugar α-glucosidase inhibitors. Bioorganic Chemistry, 74, 72-81. doi:10.1016/j. bioorg.2017.07.006
  • Jakalian, A., Jack, D. B., & Bayly, C. I. (2002). Fast, efficient genera- tion of high-quality atomic charges. AM1-BCC model: II. Param- eterization and validation. J Comput Chem, 23(16), 1623-1641. doi:10.1002/jcc.10128
  • Kesari, A. N., Kesari, S., Singh, S. K., Gupta, R. K., & Watal, G. (2007). Studies on the glycemic and lipidemic effect of Murraya koenigii in experimental animals. Journal of Ethnopharmacology, 112(2), 305-311. doi:10.1016/j.jep.2007.03.023
  • Nahoum, V., Roux, G., Anton, V., Rougé, P., Puigserver, A., Bischoff, H., . . . Payan, F. (2000). Crystal structures of human pancreatic alpha-amylase in complex with carbohydrate and proteinaceous inhibitors. Biochem J, 346 Pt 1(Pt 1), 201-208.
  • Okutan, L., Kongstad, K. T., Jäger, A. K., & Staerk, D. (2014). High-res- olution α-amylase assay combined with high-performance liquid chromatography–solid-phase extraction–nuclear magnetic reso- nance spectroscopy for expedited ‘dentification of α-amylase in- hibitors: proof of concept and α-amylase inhibitor in cinnamon. Journal of Agricultural and Food Chemistry, 62(47), 11465-11471. doi:10.1021/jf5047283
  • Patel, O. P. S., Mishra, A., Maurya, R., Saini, D., Pandey, J., Taneja, I., Yadav, P. P. (2016). Naturally occurring carbazole alkaloids from Murraya koenigii as potential antidiabetic agents. Journal of Natu- ral Products, 79(5), 1276-1284. doi:10.1021/acs.jnatprod.5b00883
  • Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Green- blatt, D. M., Meng, E. C., & Ferrin, T. E. (2004). UCSF Chimera a visu- alization system for exploratory research and analysis. J Comput Chem, 25(13), 1605-1612. doi:10.1002/jcc.20084
  • Richardson, D. R. (2002). Iron chelators as therapeutic agents for the treatment of cancer. Critical Reviews in Oncology/Hematology, 42(3), 267-281. doi:10.1016/S1040-8428(01)00218-9
  • Schmidt, A. W., Reddy, K. R., & Knölker, H.-J. (2012). Occurrence, biogenesis, and synthesis of biologically active carbazole alka- loids. Chemical Reviews, 112(6), 3193-3328. doi:10.1021/cr200447s
  • Schmidt, J. S., Lauridsen, M. B., Dragsted, L. O., Nielsen, J., & Staerk, D. (2012). Development of a bioassay-coupled HPLC-SPE-ttNMR platform for identification of α-glucosidase inhibitors in apple peel (Malus × domestica Borkh.). Food Chemistry, 135(3), 1692- 1699. doi:10.1016/j.foodchem.2012.05.075
  • Shahabadi, N., Kashanian, S., & Darabi, F. (2010). DNA binding and DNA cleavage studies of a water soluble cobalt(II) complex con- taining dinitrogen Schiff base ligand: The effect of metal on the mode of binding. European Journal of Medicinal Chemistry, 45(9), 4239-4245. doi:10.1016/j.ejmech.2010.06.020
  • Shehzad, M. T., Imran, A., Njateng, G. S. S., Hameed, A., Islam, M., al-Rashida, M., . . . Iqbal, J. (2019). Benzoxazinone-thiosemicarba- zones as antidiabetic leads via aldose reductase inhibition: Syn- thesis, biological screening and molecular docking study. Bioor- ganic Chemistry, 87, 857-866. doi:10.1016/j.bioorg.2018.12.006
  • Shehzad, M. T., Khan, A., Halim, S. A., Hameed, A., Imran, A., Iqbal, J., ... Al-Harrasi, A. (2021). Synthesis of indole-substituted thiosemi- carbazones as an aldose reductase inhibitor: an in vitro, selectivity and in silico study. Future Medicinal Chemistry, 13(14), 1185-1201. doi:10.4155/fmc-2020-0060
  • Tagami, T., Yamashita, K., Okuyama, M., Mori, H., Yao, M., & Kimura, A. (2013). Molecular basis for the recognition of long-chain sub- strates by plant α-glucosidases. J Biol Chem, 288(26), 19296-19303. doi:10.1074/jbc.M113.465211
  • Tan, M. A., Sharma, N., & An, S. S. A. (2022). Phyto-carbazole al- kaloids from the Rutaceae Family as potential protective agents against neurodegenerative diseases. Antioxidants, 11(3), 493. Re- trieved from https://www.mdpi.com/2076-3921/11/3/493
  • Tok, F., Küçükal, B., Baltaş, N., Tatar Yılmaz, G., & Koçyiğit- Kaymakçıoğlu, B. (2022). Synthesis of novel thiosemicarbazone derivatives as antidiabetic agent with enzyme kinetic studies and antioxidant activity. Phosphorus, Sulfur, and Silicon and the Related Elements, 1-11. doi:10.1080/10426507.2022.2099857

Yıl 2023, Cilt: 53 Sayı: 1, 39 - 44, 28.04.2023

Hasan Şahin Alev Arslantürk Bingül İbrahim Fazıl Şengül Murat Bingül

https://doi.org/10.26650/IstanbulJPharm.2023.1164443

Öz

Proje Numarası

Eczacılık.21.002

Kaynakça

  • Adib, M., Peytam, F., Shourgeshty, R., Mohammadi-Khanaposhtani, M., Jahani, M., Imanparast, S., . . . Mahdavi, M. (2019). Design and synthesis of new fused carbazole-imidazole derivatives as anti- diabetic agents: In vitro α-glucosidase inhibition, kinetic, and in silico studies. Bioorganic & Medicinal Chemistry Letters, 29(5), 713- 718. doi:10.1016/j.bmcl.2019.01.012
  • Antholine, W., Knight, J., Whelan, H., & Petering, D. H. (1977). Stud- ies of the reaction of 2-formylpyridine thiosemicarbazone and its iron and copper complexes with biological systems. Molecular Pharmacology, 13(1), 89-98.
  • Apostolidis, E., & Lee, C. M. (2010). In vitro potential of Ascophyl- lum nodosum phenolic antioxidant-mediated α-glucosidase and α-amylase inhibition. Journal of Food Science, 75(3), 97-102. doi:10.1111/j.1750-3841.2010.01544.x
  • Beidokhti, M. N., Eid, H. M., Villavicencio, M. L. S., Jager, A. K., Lobbens, E. S., Rasoanaivo, P. R., . . . Staerk, D. (2020). Evaluation of the anti- diabetic potential of Psidium guajava L. (Myrtaceae) using assays for alpha-glucosidase, alpha-amylase, muscle glucose uptake, liver glucose production, and triglyceride accumulation in adipocytes. J Ethnopharmacol, 257, 112877. doi:10.1016/j.jep.2020.112877
  • Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weis- sig, H., . . . Bourne, P. E. (2000). The Protein Data Bank. Nucleic Acids Res, 28(1), 235-242. doi:10.1093/nar/28.1.235
  • Bingul, M., Şenkuytu, E., Saglam, M. F., Boga, M., Kandemir, H., & Sen- gul, I. F. (2019). Synthesis, photophysical and antioxidant properties of carbazole-based bis-thiosemicarbazones. Research on Chemical Intermediates, 45(9), 4487-4499. doi:10.1007/s11164-019-03844-x
  • Biovia, D. S. (2019). Discovery Visualizer Studio v19.1.0.18287 (Ver- sion v19.1.0.18287). San Diego: Dassault Systemes.
  • Dhameja, M., & Gupta, P. (2019). Synthetic heterocyclic candi- dates as promising α-glucosidase inhibitors: An overview. Euro- pean Journal of Medicinal Chemistry, 176, 343-377. doi:10.1016/j. ejmech.2019.04.025
  • Frisch, M. J., Schlegel, H. B., Scuseria, G. E., Robb, M. A., Cheeseman, J. R., Scalmani, G., . . . Nakatsuji, H. (2009). Gaussian 09, Revision E.01. Wallingford CT.
  • Graebe, C., & Glaser, C. (1872). Ueber Carbazol. Berichte der Deutschen Chemischen Gesellschaft. 163(3), 343-360. doi. org/10.1002/jlac.18721630305
  • Iqbal, S., Khan, M. A., Javaid, K., Sadiq, R., Fazal-ur-Rehman, S., Choudhary, M. I., & Basha, F. Z. (2017). New carbazole linked 1,2,3-triazoles as highly potent non-sugar α-glucosidase inhibitors. Bioorganic Chemistry, 74, 72-81. doi:10.1016/j. bioorg.2017.07.006
  • Jakalian, A., Jack, D. B., & Bayly, C. I. (2002). Fast, efficient genera- tion of high-quality atomic charges. AM1-BCC model: II. Param- eterization and validation. J Comput Chem, 23(16), 1623-1641. doi:10.1002/jcc.10128
  • Kesari, A. N., Kesari, S., Singh, S. K., Gupta, R. K., & Watal, G. (2007). Studies on the glycemic and lipidemic effect of Murraya koenigii in experimental animals. Journal of Ethnopharmacology, 112(2), 305-311. doi:10.1016/j.jep.2007.03.023
  • Nahoum, V., Roux, G., Anton, V., Rougé, P., Puigserver, A., Bischoff, H., . . . Payan, F. (2000). Crystal structures of human pancreatic alpha-amylase in complex with carbohydrate and proteinaceous inhibitors. Biochem J, 346 Pt 1(Pt 1), 201-208.
  • Okutan, L., Kongstad, K. T., Jäger, A. K., & Staerk, D. (2014). High-res- olution α-amylase assay combined with high-performance liquid chromatography–solid-phase extraction–nuclear magnetic reso- nance spectroscopy for expedited ‘dentification of α-amylase in- hibitors: proof of concept and α-amylase inhibitor in cinnamon. Journal of Agricultural and Food Chemistry, 62(47), 11465-11471. doi:10.1021/jf5047283
  • Patel, O. P. S., Mishra, A., Maurya, R., Saini, D., Pandey, J., Taneja, I., Yadav, P. P. (2016). Naturally occurring carbazole alkaloids from Murraya koenigii as potential antidiabetic agents. Journal of Natu- ral Products, 79(5), 1276-1284. doi:10.1021/acs.jnatprod.5b00883
  • Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Green- blatt, D. M., Meng, E. C., & Ferrin, T. E. (2004). UCSF Chimera a visu- alization system for exploratory research and analysis. J Comput Chem, 25(13), 1605-1612. doi:10.1002/jcc.20084
  • Richardson, D. R. (2002). Iron chelators as therapeutic agents for the treatment of cancer. Critical Reviews in Oncology/Hematology, 42(3), 267-281. doi:10.1016/S1040-8428(01)00218-9
  • Schmidt, A. W., Reddy, K. R., & Knölker, H.-J. (2012). Occurrence, biogenesis, and synthesis of biologically active carbazole alka- loids. Chemical Reviews, 112(6), 3193-3328. doi:10.1021/cr200447s
  • Schmidt, J. S., Lauridsen, M. B., Dragsted, L. O., Nielsen, J., & Staerk, D. (2012). Development of a bioassay-coupled HPLC-SPE-ttNMR platform for identification of α-glucosidase inhibitors in apple peel (Malus × domestica Borkh.). Food Chemistry, 135(3), 1692- 1699. doi:10.1016/j.foodchem.2012.05.075
  • Shahabadi, N., Kashanian, S., & Darabi, F. (2010). DNA binding and DNA cleavage studies of a water soluble cobalt(II) complex con- taining dinitrogen Schiff base ligand: The effect of metal on the mode of binding. European Journal of Medicinal Chemistry, 45(9), 4239-4245. doi:10.1016/j.ejmech.2010.06.020
  • Shehzad, M. T., Imran, A., Njateng, G. S. S., Hameed, A., Islam, M., al-Rashida, M., . . . Iqbal, J. (2019). Benzoxazinone-thiosemicarba- zones as antidiabetic leads via aldose reductase inhibition: Syn- thesis, biological screening and molecular docking study. Bioor- ganic Chemistry, 87, 857-866. doi:10.1016/j.bioorg.2018.12.006
  • Shehzad, M. T., Khan, A., Halim, S. A., Hameed, A., Imran, A., Iqbal, J., ... Al-Harrasi, A. (2021). Synthesis of indole-substituted thiosemi- carbazones as an aldose reductase inhibitor: an in vitro, selectivity and in silico study. Future Medicinal Chemistry, 13(14), 1185-1201. doi:10.4155/fmc-2020-0060
  • Tagami, T., Yamashita, K., Okuyama, M., Mori, H., Yao, M., & Kimura, A. (2013). Molecular basis for the recognition of long-chain sub- strates by plant α-glucosidases. J Biol Chem, 288(26), 19296-19303. doi:10.1074/jbc.M113.465211
  • Tan, M. A., Sharma, N., & An, S. S. A. (2022). Phyto-carbazole al- kaloids from the Rutaceae Family as potential protective agents against neurodegenerative diseases. Antioxidants, 11(3), 493. Re- trieved from https://www.mdpi.com/2076-3921/11/3/493
  • Tok, F., Küçükal, B., Baltaş, N., Tatar Yılmaz, G., & Koçyiğit- Kaymakçıoğlu, B. (2022). Synthesis of novel thiosemicarbazone derivatives as antidiabetic agent with enzyme kinetic studies and antioxidant activity. Phosphorus, Sulfur, and Silicon and the Related Elements, 1-11. doi:10.1080/10426507.2022.2099857
Toplam 26 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Eczacılık ve İlaç Bilimleri
Bölüm Original Article
Yazarlar

Hasan Şahin 0000-0002-8325-8116

Alev Arslantürk Bingül Bu kişi benim 0000-0003-0744-0968

İbrahim Fazıl Şengül 0000-0001-9386-4892

Murat Bingül 0000-0002-3909-0694

Proje Numarası Eczacılık.21.002
Yayımlanma Tarihi 28 Nisan 2023
Gönderilme Tarihi 19 Ağustos 2022
Yayımlandığı Sayı Yıl 2023 Cilt: 53 Sayı: 1

Kaynak Göster

APA Şahin, H., Arslantürk Bingül, A., Şengül, İ. F., Bingül, M. (2023). Biological and computational evaluation of carbazole-based bis-thiosemicarbazones: A selective enzyme inhibition study between α-amylase and α-glucosidase. İstanbul Journal of Pharmacy, 53(1), 39-44. https://doi.org/10.26650/IstanbulJPharm.2023.1164443
AMA Şahin H, Arslantürk Bingül A, Şengül İF, Bingül M. Biological and computational evaluation of carbazole-based bis-thiosemicarbazones: A selective enzyme inhibition study between α-amylase and α-glucosidase. iujp. Nisan 2023;53(1):39-44. doi:10.26650/IstanbulJPharm.2023.1164443
Chicago Şahin, Hasan, Alev Arslantürk Bingül, İbrahim Fazıl Şengül, ve Murat Bingül. “Biological and Computational Evaluation of Carbazole-Based Bis-Thiosemicarbazones: A Selective Enzyme Inhibition Study Between α-Amylase and α-Glucosidase”. İstanbul Journal of Pharmacy 53, sy. 1 (Nisan 2023): 39-44. https://doi.org/10.26650/IstanbulJPharm.2023.1164443.
EndNote Şahin H, Arslantürk Bingül A, Şengül İF, Bingül M (01 Nisan 2023) Biological and computational evaluation of carbazole-based bis-thiosemicarbazones: A selective enzyme inhibition study between α-amylase and α-glucosidase. İstanbul Journal of Pharmacy 53 1 39–44.
IEEE H. Şahin, A. Arslantürk Bingül, İ. F. Şengül, ve M. Bingül, “Biological and computational evaluation of carbazole-based bis-thiosemicarbazones: A selective enzyme inhibition study between α-amylase and α-glucosidase”, iujp, c. 53, sy. 1, ss. 39–44, 2023, doi: 10.26650/IstanbulJPharm.2023.1164443.
ISNAD Şahin, Hasan vd. “Biological and Computational Evaluation of Carbazole-Based Bis-Thiosemicarbazones: A Selective Enzyme Inhibition Study Between α-Amylase and α-Glucosidase”. İstanbul Journal of Pharmacy 53/1 (Nisan 2023), 39-44. https://doi.org/10.26650/IstanbulJPharm.2023.1164443.
JAMA Şahin H, Arslantürk Bingül A, Şengül İF, Bingül M. Biological and computational evaluation of carbazole-based bis-thiosemicarbazones: A selective enzyme inhibition study between α-amylase and α-glucosidase. iujp. 2023;53:39–44.
MLA Şahin, Hasan vd. “Biological and Computational Evaluation of Carbazole-Based Bis-Thiosemicarbazones: A Selective Enzyme Inhibition Study Between α-Amylase and α-Glucosidase”. İstanbul Journal of Pharmacy, c. 53, sy. 1, 2023, ss. 39-44, doi:10.26650/IstanbulJPharm.2023.1164443.
Vancouver Şahin H, Arslantürk Bingül A, Şengül İF, Bingül M. Biological and computational evaluation of carbazole-based bis-thiosemicarbazones: A selective enzyme inhibition study between α-amylase and α-glucosidase. iujp. 2023;53(1):39-44.
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